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TACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGgtatatcaaaataagacgcgttagtgctaaataaatgaaattccaagtaaaaatatgccattctctgtaagagaataatagaaaaatcataattgcccat...
species | Glycine max |
transcript | GLYMA17G10610.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTT-GTGGAGACCAG GTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAAEST: gi|7146726|gb|AW508648.1|AW508648
genomic: GTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGgtatatcaaa ... atattggcagGTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAA
EST: GTGAAGTCTATGTGACACAAAAGATTCTAGAGAATTTTTGTGGAGACCAG GTTCGTTTCCTGGCGAAG-TCTGGTGCTGTACCTGGAAATCATCTTGTACAEST: gi|209702140|gb|BW677940.1|BW677940
genomic: GTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGgtatatcaaa ... atattggcagGTTCGTTTCCTGGC-AAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACA
EST: GTGAAGTCTATGTGACACATAAGTTTCTAGAGAATTTTTGTGGACACCAC GTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAEST: gi|24205736|gb|BU964989.1|BU964989
genomic: GTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGgtatatcaaa ... atattggcagGTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACA
EST: GTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAG GTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAA
genomic: GTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGgtatatcaaa ... atattggcagGTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGgtatatcaaaataagacgcgttagtgctaaataaatgaaattccaagtaaaaatatgccattctctgtaagagaataatagaaaaatcataattgcccat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaatgaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatagaaa