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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATACCCTATTATGACTCGATCTTTGATGAAGGCAGGCCGTCCAATCTACTTCTCGCTATGTGAATGgtagtttttgtttgtttttagattgttaattgttttcaaattttgcactcaatttttccctctaattacacgttgttttgttaataag

Basic information

species Glycine max
transcript GLYMA16G34640.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G34640.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv10s0071g01100.t01 (Vitis vinifera), 5'ss of exon 8
ATACCCTATTATGACTCGATCTTTGATGAAGGCAGGCCGTCCAATCTACTTCTCGCTATGTGAATGgtagtttt-tgtttgtttttagattgttaattgttttcaaat---tttgcactcaatttt--tccctctaat-tacacgttgttttgttaataag
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GTACCCTGTAATGACCCGTGCTTTGATGAAGGCAGGACGCCCAATCTTCTTCTCACTATGTGAATGgtaatcttatttttctccacctatgttttttttttttccagtaaatattttcccacttttggttggtttgatgtattttttctttcgtttgttag