1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTGGAGACATGCTTATTTCAAGTTCATAAGCAATTTATCAGACGCTATTTATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTGgtaataatattttagtcttcgtatatatacttcattttcctttatatgataaatagcagtcacaaaccattgtttacaactagatggcgtttttctcttt...
species | Glycine max |
transcript | GLYMA16G29320.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTG AAAAATTCTGAATTCTAGGTGCCAGCTTGTGGAGGTGGAAAATGCAAAGAGEST: gi|120530318|gb|EH258451.1|EH258451
genomic: ATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTGgtaataatat ... tttttgacagAAAAATTCTGAATTCTAGGTGCCAGCTTGTGGAGGTGGAAAATGCAAAGAG
EST: ATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTG AAAAATTCTGAATTCTAGGTGCCAGCTTGTGGAGGTGGAAAATGCCAAGAGEST: gi|308098961|gb|HO760802.1|HO760802
genomic: ATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTGgtaataatat ... tttttgacagAAAAATTCTGAATTCTAGGTGCCAGCTTGTGGAGGTGGAAAATGCAAAGAG
EST: ATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTG AAAAATTCTGAATTCTAGGTGCCAGCTTGTGGAGGTGGAAAATGCAAAGAG
genomic: ATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTGgtaataatat ... tttttgacagAAAAATTCTGAATTCTAGGTGCCAGCTTGTGGAGGTGGAAAATGCAAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGAGACATGCTTATTTCAAGTTCATAAGCAATTTATCAGACGCTATTTATGTCATGGTAGCAGTGAAAGTTTCCAAGTGGCGTCACAGAGGATAGCTGgtaataatattttagtcttcgtatatatacttcattttcctttatatgataaatagcagtcacaaaccattgtttacaactagatggcgtttttctcttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT