1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATCAACTTCTGGTTCTTCCCTCGGTAATTCATCCCATGTCTTGGCAGATGCTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAATgtatgtagctcaagtaactgcctctattgtcacctttggttttcaaaaaaagcatctcttattatatgatttccttggagatatatgttaatattttcaa...
species | Glycine max |
transcript | GLYMA16G26700.3 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAAT GTACTTGATTATGTTGCATCTATGCTAGAAATTACGAAAGAAGAGCTTGCTEST: gi|254326485|gb|GR841077.1|GR841077
genomic: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAATgtatgtagct ... atacttacagGTACTTGATTATGTTGCATCTATGCTAGAAATTACGAAAGAAGAGCTTGCT
EST: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAAT GTACTTGATTATGTTGCATCTATGCTAGAAATTACGAAAGAAGAGCTTGCTEST: gi|254341607|gb|GR852744.1|GR852744
genomic: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAATgtatgtagct ... atacttacagGTACTTGATTATGTTGCATCTATGCTAGAAATTACGAAAGAAGAGCTTGCT
EST: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAAT GTACTTGATTATGTTGCATCTATGCTAGAAATTACGAAAGAAGAGCTTGCTEST: gi|193462881|gb|FK427352.1|FK427352
genomic: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAATgtatgtagct ... atacttacagGTACTTGATTATGTTGCATCTATGCTAGAAATTACGAAAGAAGAGCTTGCT
EST: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAAT GTACTTGATTATGTTGCATCTATGCTAGAAATTACGAA
genomic: CTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAATgtatgtagct ... atacttacagGTACTTGATTATGTTGCATCTATGCTAGAAATTACGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAACTTCTGGTTCTTCCCTCGGTAATTCATCCCATGTCTTGGCAGATGCTTCGATGTTGCCAAAGGAAACACTCAATCATCCCGCAAACATTCATAATgtatgtagctcaagtaactgcctctattgtcacctttggttttcaaaaaaagcatctcttattatatgatttccttggagatatatgttaatattttcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA