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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTATTTGTGCAAGAACCGCGTGGACTTACGGAAAGTCTGGTGGCAGCATTTCCCATGCTTTATCAGTATACAGTTGTCAACTTCGTCACCCTAACCAGgtggggtacttcattaaagcttggtaattcactacaagaatatttattgccatggaggaaatttgatgcactaggtcatttgtatactgacag

Basic information

species Glycine max
transcript GLYMA16G00210.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G00210.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv12s0035g01920.t01 (Vitis vinifera), 5'ss of exon 7
GCCTATTTGTGCAAGAACCGCGTGGACTTACGGAAAGTCTGGTGGCAGCATTTCCCATGCTTTATCAGTATACAGTTGTCAACTTCGTCACCCTAACCAGgtggggtacttcattaaagcttggtaattcactacaagaatattt----attgccatggaggaaatttgatgcactaggtcatttgtatactgacag
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GCCCATTTGTGCTCGAACAGCATGGGCCTATGGGAAGGCCGGTGGCCGCATTTCTCATGCTTTATCAGTTTACAGCTGTCAACTTCGTCAACCAAATCAGgtttgaaa-ttcatt-----ttcatatttacctgtggacatattttgcaactgatggggcaggaaagtatagtgataataatggaatacactaacag