1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTGCCGGAGTTGTCAAGGATTGGGTGGTTGTCTTACTGTCTGCTGTTCTGTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTGgtaagtaactgattctgtttgaccttctaaattttcctgtctcattggatatagcttttgaggatttttcataacctttcctgcaaatgccagagtactt...
species | Glycine max |
transcript | GLYMA15G40160.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTG CCATTGCTGGGGTAGCGGCATATAATAATTGCAAGTTGAAAAAAGAAACCTEST: gi|193687097|gb|FK630380.1|FK630380
genomic: GTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTGgtaagtaact ... ttttatacagCCATTGCTGGGGTAGCGGCATATAATAATTGCAAGTTGAAAAAAGAAACCT
EST: GTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTG CCATTGCTGGGGTAGCGGEST: gi|22931839|gb|BU548978.1|BU548978
genomic: GTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTGgtaagtaact ... ttttatacagCCATTGCTGGGGTAGCGG
EST: GTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTG CCATTGCTGGGGTAGCGGCATATAATAATTGCAAGTTGAAAAAAGAAACCT
genomic: GTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTGgtaagtaact ... ttttatacagCCATTGCTGGGGTAGCGGCATATAATAATTGCAAGTTGAAAAAAGAAACCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCCGGAGTTGTCAAGGATTGGGTGGTTGTCTTACTGTCTGCTGTTCTGTTTGCTGATACAAAGTTAACACTTATCAATTTGTTTGGTTATGCAATTGgtaagtaactgattctgtttgaccttctaaattttcctgtctcattggatatagcttttgaggatttttcataacctttcctgcaaatgccagagtactt
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctttcc