1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
AGCAGGTGCTTTTAAAATTGGTGACACAGCTGGAACAATTGACAATATAATTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTgtatgtagttattcacttcttgcttatgtttatgtcatcttcatattagggatacactttttcttctagtaccactataaatcttttgataatcccaacc...
species | Glycine max |
transcript | GLYMA15G15020.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCT GGTGGGATGTCCAATGAACTCTACAACACTATTEST: gi|192326116|gb|FK016253.1|FK016253
genomic: TTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTgtatgtagtt ... taaattgcagGGTGGGATGTCCAATGAACTCTACAACACTATT
EST: TTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCT GGTGGGATGTCCAATGAACTCTACAACACTATTGCCCGTGTAACTGATGGGEST: gi|209699373|gb|BW664092.1|BW664092
genomic: TTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTgtatgtagtt ... taaattgcagGGTGGGATGTCCAATGAACTCTACAACACTATTGCCCGTGTAACTGATGGG
EST: TTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCT GGTGGGATGTCCAATGAACTCTACAACACTAT
genomic: TTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTgtatgtagtt ... taaattgcagGGTGGGATGTCCAATGAACTCTACAACACTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCAGGTGCTTTTAAAATTGGTGACACAGCTGGAACAATTGACAATATAATTCAGTGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTgtatgtagttattcacttcttgcttatgtttatgtcatcttcatattagggatacactttttcttctagtaccactataaatcttttgataatcccaacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT