1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAGCTCTTGACAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGGgtaggttccctttcaaccccagtttaaagtagcattttaattttaatttatacacttgtataccgcctttttcttttcctaacattctattggtaaataa...
species | Glycine max |
transcript | GLYMA15G12220.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGG TTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAEST: gi|6724491|gb|AW308890.1|AW308890
genomic: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
EST: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGG TTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAEST: gi|26045902|gb|CA783326.1|CA783326
genomic: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
EST: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGG TTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAEST: gi|151403296|gb|EV273106.1|EV273106
genomic: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
EST: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGG TTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
genomic: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTCTTGACAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGGgtaggttccctttcaaccccagtttaaagtagcattttaattttaatttatacacttgtataccgcctttttcttttcctaacattctattggtaaataa
- - - - - - - - - - - - - - AGCTGA