Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACAAGACGAATAATTGCAGGAAAGTGGGGTTCTAATAATGGACAAGCCTGCATTTCTCCAGATTATATTATAACAACTAAAGACTATGCTCCCAAGTTGgtaataagttttttccaagtgttgttagaatcctaaatttgttggtttgtttagtgtttggttccttctatttctag

Basic information

species Glycine max
transcript GLYMA14G24140.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G24140.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv18s0001g02440.t01 (Vitis vinifera), 5'ss of exon 8
AACAAGACGAATAATTGCAGGAAAGTGGGGTTCTAATAATGGACAAGCCTGCATTTCTCCAGATTATATTATAACAACTAAAGACTATGCTCCCAAGTTGgtaataagttttttccaagtgttgttagaatcctaa--atttgttggtttgtttagtgtttggttccttctatttctag-----
||  || || |||   |  || |||||||     ||||||||||||||||||||| |||| ||||||||| | ||||| ||||||| |||||| ||||||||||      |  |     ||   ||||  |  ||   |||  |  |||| |||  | ||    ||||  || || |       
AATTAGGCGGATAGCAGGGGGCAAGTGGGCAAGCAATAATGGACAAGCCTGCATTGCTCCTGATTATATTGTCACAACAAAAGACTTTGCTCCAAAGTTGgtaaggctgctaatatgtatgaaattagtttggtatttattcctctgtttatttcattttcctctcctgttactttttctccag