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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCGGTGGAACACCTTCTGCATGGAAATCCCCTTGGTTCTTCAACACTTTTCTATCTAGCCCCAGACTTGATACCGAAATTCTAATTGAGgtactgtaggttttgttgaataactacttttttgatcttgcaaacggtttcagtttttcgctgtgctaaaatctgtgaacatttttacag

Basic information

species Glycine max
transcript GLYMA14G21490.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51335733|gb|CO979599.1|CO979599
EST:     TCAACACTTTTCTATCTAGCCCCAGACTTGATACCGAAATTCTAATTGAG                         GATTTTGGGTATTTTATGAGTCCAGGTGATAGAAGCTATGATGCTCTCGGG
genomic: TCAACACTTTTCTATCTAGCCCCAGACTTGATACCGAAATTCTAATTGAGgtactgtagg ... atttttacagGATTTTGGGTATTTTATGAGTCCAGGTGATAGAAGCTATGATGCTCTCGGG
EST: gi|24136690|gb|BU927200.1|BU927200
EST:     TCAACACTTTTCTATCTAGCCCCAGACTTGATACCGAAATTCTAATTGAG                         GATTTTGGGTATTTTATGAGTCCAGGTGATAGAAGCTATGATGCTCTCGGG
genomic: TCAACACTTTTCTATCTAGCCCCAGACTTGATACCGAAATTCTAATTGAGgtactgtagg ... atttttacagGATTTTGGGTATTTTATGAGTCCAGGTGATAGAAGCTATGATGCTCTCGGG