1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAGgtgatctcttaattctctccaagacttatatataaagtgtatgttgagatgaatgataattaataatatatagttggttgatgatgcatgcatgcatgtag
species | Glycine max |
transcript | GLYMA14G03100.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAG ATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGAEST: gi|6964510|gb|AW433203.1|AW433203
genomic: GAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAGgtgatctctt ... atgcatgtagATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGA
EST: GGGAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAG ATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGAEST: gi|208046429|gb|GD849069.1|GD849069
genomic: GGGAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAGgtgatctctt ... atgcatgtagATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGA
EST: GAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAG ATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGAEST: gi|9984839|gb|BE658947.1|BE658947
genomic: GAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAGgtgatctctt ... atgcatgtagATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGA
EST: GGGAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAG ATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGA
genomic: GGGAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAGgtgatctctt ... atgcatgtagATAGCTGAACACGAGAAAGCACAACAACGGCAACAGGATATGATACCGGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAATAGAGCTGCAAAACCATAATAATTTTCTGAGAGCTAAGgtgatctcttaattctctccaagacttatatataaagtgtatgttgagatgaatgataattaataatatatagttggttgatgatgcatgcatgcatgtag
- - AGAGCT
- - - AGCTGC
- - - - - - - - - - - - - - - - AGAGCT