1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaagaacttctgaaatttacagattcgagctccaagtatgatattaacttctttttctttttatttgataataaag
species | Glycine max |
transcript | GLYMA14G02180.4 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAG GCTGAAGTGGAAGT-GAGAGACTTGA-CAGCTGAAAGCC-GCAGGATGAAGEST: gi|38193636|gb|CF922842.1|CF922842
genomic: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaaga ... gataataaagGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAG
EST: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAG GCTGAAGTGGAAGTTGGGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAGEST: gi|192314484|gb|FK008426.1|FK008426
genomic: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaaga ... gataataaagGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAG
EST: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAG GCTGAAGTGGAAGTTGAGAGACTTGGTCAGCTGAAAGCCAGCAGGATGAAGEST: gi|207712616|gb|GD694528.1|GD694528
genomic: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaaga ... gataataaagGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAG
EST: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAG GCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAEST: gi|5058140|gb|AI736616.1|AI736616
genomic: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaaga ... gataataaagGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCA
EST: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAG GCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAGEST: gi|192314483|gb|FK008425.1|FK008425
genomic: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaaga ... gataataaagGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAG
EST: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAG GCTGAAGTGGAAGTTGAGAGACTTGGTCAGCTGAAAGCCAGCAGGATGAAG
genomic: TTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaaga ... gataataaagGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGgtactaaagaacttctgaaatttacagattcgagctccaagtatgatattaacttctttttctttttatttgataataaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG