1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GCACCCCTTGTATTACGGACTGTGTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgttatgtcttcttgattattagtttatattttcaaacatttgagatttacatataaaaagggcgagccaatgcatgagggggttcccttagagt...
species | Glycine max |
transcript | GLYMA13G38690.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTGATCGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|22524282|gb|BU083093.1|BU083093
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|58020255|gb|CX706997.1|CX706997
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|14125427|gb|BG789865.1|BG789865
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|58020043|gb|CX706785.1|CX706785
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|13788867|gb|BG651458.1|BG651458
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|21602514|gb|BQ612845.1|BQ612845
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGACEST: gi|13788871|gb|BG651462.1|BG651462
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
EST: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAG GATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
genomic: GTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgtta ... tacataacagGATTGCCAAGGATCCTCGATTTGAGAGAATACTATGTACTCATAAAGGGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCACCCCTTGTATTACGGACTGTGTGATGGCAGAACTCGAGAAGTTAGGCCAAAAATATCGTGTAGCTCTAAGgtagatgttatgtcttcttgattattagtttatattttcaaacatttgagatttacatataaaaagggcgagccaatgcatgagggggttcccttagagt
- - - - - - - - - - - - - - - - - - - AGAAGT