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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGAATCCCACCACGCCATGCAATGTACCAAATTGTAGATCCAGGCATTGGCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttcaacactaaaactttcattattgaatttgtatgcctatgtgatatgcaaagtatttttaaataatagcaaaaatttatcaaaaataatccat...

Basic information

species Glycine max
transcript GLYMA13G37010.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22541350|gb|BU091193.1|BU091193
EST:     GCATCCCGGCCAGCCAACCGCCACCTCGA-CCCTTGT-NACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
EST: gi|117557759|gb|EG702144.1|EG702144
EST:     GCCAACTGCCACCTCGACCCCTTGTCGACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
EST: gi|117557758|gb|EG702143.1|EG702143
EST:     GCCAACTGCCACCTCGACCCCTTGTCGACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
EST: gi|151404848|gb|EV274662.1|EV274662
EST:     GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
EST: gi|117557760|gb|EG702145.1|EG702145
EST:     GCCAACTGCCACCTCGACCCCTTGTCGACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
EST: gi|22933590|gb|BU550729.1|BU550729
EST:     GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
EST: gi|22525592|gb|BU084403.1|BU084403
EST:     GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCG                         TCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG
genomic: GCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGgtaaatttca ... gttttgacagTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGG