1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTAGATTTGGTTAATGATGGACCAGTTACCATGCAGCTTGATTCAAATTCACCAAAgtgagttgatgatgttactttaattttgaatgagaaatgctcatcttttctgttataagaatatcattaacaattcatatcattctggaatacag
species | Glycine max |
transcript | GLYMA13G30670.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTGGTTAATGATGGACCAGTTACCATGCAGCTTGATTCAAATTCACCAAA TTGATGCAGCAGAATCTTGATCAGCGGTTGATCTGGCTTGATGAAGTTGAGEST: gi|13478787|gb|BG508130.1|BG508130
genomic: TTGGTTAATGATGGACCAGTTACCATGCAGCTTGATTCAAATTCACCAAAgtgagttgat ... tggaatacagTTGATGCAGCAGAATCTTGATCAGCGGTTGATCTGGCTTGATGAAGTTGAG
EST: TTGGTTAATGATGGACCAGTTACCATGCAGCTTGATTCAAATTCACCAAA TTGATGCAGCAGAATCTTGATCAGCGGTTGATCTGGCTTGATGAAGTTGAGEST: gi|193658132|gb|FK602565.1|FK602565
genomic: TTGGTTAATGATGGACCAGTTACCATGCAGCTTGATTCAAATTCACCAAAgtgagttgat ... tggaatacagTTGATGCAGCAGAATCTTGATCAGCGGTTGATCTGGCTTGATGAAGTTGAG
EST: TTGATTCAAATTCACCAAA TTGATGCAGCAGAATCTTGATCAGCGGTTGATCTGGCTTGATGAAGTTGAG
genomic: TTGATTCAAATTCACCAAAgtgagttgat ... tggaatacagTTGATGCAGCAGAATCTTGATCAGCGGTTGATCTGGCTTGATGAAGTTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGATTTGGTTAATGATGGACCAGTTACCATGCAGCTTGATTCAAATTCACCAAAgtgagttgatgatgttactttaattttgaatgagaaatgctcatcttttctgttataagaatatcattaacaattcatatcattctggaatacag
- - - - - - - GATGGA
- - - - - - - - - - - - - - - - GCAGCT