1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattattatttttgtgctataaaattaatatcatgtactatcatatcttgtcaattatttggatgcttggctcgagcag
species | Glycine max |
transcript | GLYMA13G20210.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTGATCAGCATAGAGACATGAGGATTTACATAGACAACATGAGTTATGAG GAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCTEST: gi|209720200|gb|BW674538.1|BW674538
genomic: TTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattatta ... gctcgagcagGAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCT
EST: AGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAG GAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCTEST: gi|209701647|gb|BW673133.1|BW673133
genomic: AGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattatta ... gctcgagcagGAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCT
EST: TTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAG GAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCTEST: gi|213616823|gb|DB977022.1|DB977022
genomic: TTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattatta ... gctcgagcagGAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCT
EST: TTGATCAGCATAGAGACATGAGGATGGACATAGACTTTATGAGTTATGAG GAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTATAGEST: gi|58016048|gb|CX702790.1|CX702790
genomic: TTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattatta ... gctcgagcagGAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCT
EST: TTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAG GAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCT
genomic: TTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattatta ... gctcgagcagGAACTACTTGCACTTGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGgtaattattatttttgtgctataaaattaatatcatgtactatcatatcttgtcaattatttggatgcttggctcgagcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA