1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGgtaagttttaagtttgtctgtgtgacattttgatctagtaattttttgtgagttccactacatggcctgggtttgaacctgactggcatagcatgagggg...
species | Glycine max |
transcript | GLYMA13G19030.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGG GTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTGAEST: gi|298196665|gb|HO041408.1|HO041408
genomic: GCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGgtaagtttta ... aattttgcagGTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTGA
EST: GCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGG GTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTGAEST: gi|58018085|gb|CX704827.1|CX704827
genomic: GCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGgtaagtttta ... aattttgcagGTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTGA
EST: TACAAGGGTCAT-GGTACTTTTTGG GTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTG
genomic: TACAAGGGTCATGGGTAC-TTTTGGgtaagtttta ... aattttgcagGTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGgtaagttttaagtttgtctgtgtgacattttgatctagtaattttttgtgagttccactacatggcctgggtttgaacctgactggcatagcatgagggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA