1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGAAAAGGAGGGAATGATCTGGATTTGGCCTGGCAATGACCCCCCAGCAGCCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGgtatgttatgaatataatctgtcccttaggtagtgttcgatgcacaaaataaaagaattacaattatatgattgattaaaagaaaaagaaacctgtgttttcttacttgttggttcttcacttgttacag
species | Glycine max |
transcript | GLYMA13G03430.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAG ATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTGEST: gi|13125056|gb|BG315599.1|BG315599
genomic: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGgtatgttatg ... cttgttacagATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTG
EST: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAG ATTGTGATGGAACTTCCAATTGAACACGGGTTACTTTTGGACAATCTTTTGEST: gi|22524453|gb|BU083264.1|BU083264
genomic: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGgtatgttatg ... cttgttacagATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTG
EST: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAG ATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTGEST: gi|17153877|gb|BM143810.1|BM143810
genomic: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGgtatgttatg ... cttgttacagATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTG
EST: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAG ATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTG
genomic: CCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGgtatgttatg ... cttgttacagATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAAAGGAGGGAATGATCTGGATTTGGCCTGGCAATGACCCCCCAGCAGCCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGgtatgttatgaatataatctgtcccttaggtagtgttcgatgcacaaaataaaagaattacaattatatgattgattaaaagaaaaagaaacctgtgttttcttacttgttggttcttcacttgttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG