1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTCCATGATGTTGTTGCTTGCACTTTCCTTGTCGAGCTGCAGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGgtaaaagtagtgcttgaagtttctcaatttgaattctaatatttgcttttaattgtttggatattgtttgtatttcag
species | Glycine max |
transcript | GLYMA12G35830.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAG CCTATTGCTGCATTGCCTNATCTGGACAGGGAGCTTTCACCAGCACTGTATEST: gi|151411496|gb|EV281307.1|EV281307
genomic: AGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGgtaaaagtag ... tgtatttcagCCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCAGCACTGTAT
EST: GGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAG CCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCAGCACTGTATEST: gi|192332094|gb|FK024568.1|FK024568
genomic: AGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGgtaaaagtag ... tgtatttcagCCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCAGCACTGTAT
EST: AGCT--ACCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAG CCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCAGCACTGTAT
genomic: AGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGgtaaaagtag ... tgtatttcagCCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCAGCACTGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCATGATGTTGTTGCTTGCACTTTCCTTGTCGAGCTGCAGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGgtaaaagtagtgcttgaagtttctcaatttgaattctaatatttgcttttaattgtttggatattgtttgtatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG