1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CGAGCGGCGGGTGTGGTCCATTGATTTCTCATCAGCAGACCCAACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGgcaattccatttttgcacttggtggaatgtcagctttgaaactaaacgtactgcagtcatctgttgcatgttttatgtatattatgcgggatgtataatgagttgtttctctcacctgggatgtttctgcag
species | Glycine max |
transcript | GLYMA12G35320.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAG GGAGTTAGTGTTGGTACCATCAAAACCAAGGCAAATGTTTGCTGCGTTCAGEST: gi|193492357|gb|FK454767.1|FK454767
genomic: TGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGgcaattccat ... gtttctgcagGGAGTTAGTGTTGGTACCATCAAAACCAAGGCAAATGTTTGCTGCGTTCAG
EST: TGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAG GGAGTTAGTGTTGGTACCATCAAAACCAAGGCAAATGTTTGCTGCGTTCAG
genomic: TGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGgcaattccat ... gtttctgcagGGAGTTAGTGTTGGTACCATCAAAACCAAGGCAAATGTTTGCTGCGTTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGCGGCGGGTGTGGTCCATTGATTTCTCATCAGCAGACCCAACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGgcaattccatttttgcacttggtggaatgtcagctttgaaactaaacgtactgcagtcatctgttgcatgttttatgtatattatgcgggatgtataatgagttgtttctctcacctgggatgtttctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT