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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATCAAACAATCTTATTACAAGTTTGCCAGAAGATTTAGCAAATTGTTCCAAATTGTCTAAACTAGATATGGAGgtagtaattagtagcaaaacttagtatattaattgacagcaaacatcttaaaccttaaaaaatttaagattttattctattaaccagtgctcttactacattatcttttttgtcttcgccag

Basic information

species Glycine max
transcript GLYMA12G35110.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15201297|gb|BI424797.1|BI424797
EST:     TGCCAGAAGATTTAGCAAATTGTTCCAAATTGTCTAAACTAGATATGGAG                         GGGAACAAGCTAACAGTGATATCTGAAAATCTCATTTCATCATGGACCATG
genomic: TGCCAGAAGATTTAGCAAATTGTTCCAAATTGTCTAAACTAGATATGGAGgtagtaatta ... tcttcgccagGGGAACAAGCTAACAGTGATATCTGAAAATCTCATTTCATCATGGACCATG
EST: gi|7327236|gb|AW620958.1|AW620958
EST:     TGCCAGAAGATTTAGCAGATTGTTCCAAATTGTCTAAACTAGATATGGAG                         GGGAACAAGCTTACAGTGATATCTGAAAATCTCATTTCA
genomic: TGCCAGAAGATTTAGCAAATTGTTCCAAATTGTCTAAACTAGATATGGAGgtagtaatta ... tcttcgccagGGGAACAAGCTAACAGTGATATCTGAAAATCTCATTTCA