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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCACTGAAGGTGGAGAAACATGCGTATCTTCATTATATGTTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATgtaagatatagaaaaacattagtatgaccaagatgaatgaaaataatgcagtttgagtttactaacacattttgttattctaactgcag

Basic information

species Glycine max
transcript GLYMA12G30160.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9902915|gb|BE611883.1|BE611883
EST:     ATCGGATCATGACCATCGCTGACGATGTAAAT                         TACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
genomic: ATCGGATCATGACCATCGCTGACGATGTAAATgtaagatata ... ctaactgcagTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
EST: gi|21600943|gb|BQ611274.1|BQ611274
EST:     TTTGCTATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAAT                         TACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
genomic: TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATgtaagatata ... ctaactgcagTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
EST: gi|209701627|gb|BW667368.1|BW667368
EST:     TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAAT                         TACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
genomic: TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATgtaagatata ... ctaactgcagTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
EST: gi|9819409|gb|BE554922.1|BE554922
EST:     TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAAT                         TACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
genomic: TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATgtaagatata ... ctaactgcagTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
EST: gi|33389831|gb|CA853038.1|CA853038
EST:     GACGATGTAAAT                         TACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
genomic: GACGATGTAAATgtaagatata ... ctaactgcagTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
EST: gi|213591021|gb|DB973776.1|DB973776
EST:     TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAAT                         TACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT
genomic: TTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATgtaagatata ... ctaactgcagTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCT