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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTCTGATTTTGGCCTGGTGAAACTTGCCCCGGATGGCCAGAAGTCTGTGGCAACAAAGCTTGCAGGAACATTTGGTTATCTTGCCCCTGAATATGCAGgtaagcatattctgtacattccttctaaccttgaaacaactgttgaaatggaccattataccatgttttagtggcaatgaccacgatgttctctcggtag...

Basic information

species Glycine max
transcript GLYMA12G09960.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13180767|gb|BG352107.1|BG352107
EST:     GGCAACAAAGCTTGCAGGAACATTTGGTTATCTTGCCCCTGAATATGCAG                         TGATGGGGAAAATCACCACTAAAGTTGACGTTTTCAGCT-CGGTGTGGTCT
genomic: GGCAACAAAGCTTGCAGGAACATTTGGTTATCTTGCCCCTGAATATGCAGgtaagcatat ... tgagttgcagTGATGGGGAAAATCACCACTAAAGTTGACGTTTTCAGCTACGGTGTGGTCT
EST: gi|51336412|gb|CO980278.1|CO980278
EST:     GGCAACAAAGCTTGCAGGAACATTTGGTTATCTTGCCCCTGAATATGCAG                         TGATGGGGAAAATCACCACTAAAGTTGACGTTTTCAGCTACGGTGTGGTCT
genomic: GGCAACAAAGCTTGCAGGAACATTTGGTTATCTTGCCCCTGAATATGCAGgtaagcatat ... tgagttgcagTGATGGGGAAAATCACCACTAAAGTTGACGTTTTCAGCTACGGTGTGGTCT