1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATGCTATCTTCTCTTAAAAGGATCATGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGgttagttgtttctactttcattctttattttccctgcttcttttataagcctaagtgttgcgaccttgactttggtgctttgaattttggcag
species | Glycine max |
transcript | GLYMA12G05470.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTG AACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAAEST: gi|7691890|gb|AW760008.1|AW760008
genomic: TGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGgttagttgtt ... attttggcagAACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAA
EST: TGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTG AACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAAEST: gi|6071352|gb|AW100739.1|AW100739
genomic: TGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGgttagttgtt ... attttggcagAACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAA
EST: TGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTG AACAATTCANAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAA
genomic: TGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGgttagttgtt ... attttggcagAACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTATCTTCTCTTAAAAGGATCATGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGgttagttgtttctactttcattctttattttccctgcttcttttataagcctaagtgttgcgaccttgactttggtgctttgaattttggcag
- - - - - - - - - - - - - - - - - CAGATG