1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTGTTGTTTCTATGGCAAATTCAGGACCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatttttgtccttaaagtgtatggtttgggcgatttctagactggggatcagatgcagttggattagttcttgtaggttaagcgcagtcttttt...
species | Glycine max |
transcript | GLYMA12G03540.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATATEST: gi|6094831|gb|AW119445.1|AW119445
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
EST: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATATEST: gi|27424619|gb|CA936139.1|CA936139
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
EST: CCTGATTCCAACGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCATATG GTTGGACGCAGAGCATGTTEST: gi|213607398|gb|DB976556.1|DB976556
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTT
EST: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATATEST: gi|213589587|gb|DB982648.1|DB982648
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
EST: CCTGAATCCAATGGCTCACAGTGTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATATEST: gi|208274684|gb|GE066342.1|GE066342
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
EST: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATATEST: gi|5126719|gb|AI748455.1|AI748455
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
EST: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATATEST: gi|193489736|gb|FK455043.1|FK455043
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
EST: CCTGATTCCAATGGCTCACAG-TTTTCTTTACCACAGTGAAGGCCAGATG GTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
genomic: CCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatt ... aactttccagGTTGGATGGAGAGCATGTTGTCTTTGGCAGGGTTGTTCAAGGCATGGATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTTGTTTCTATGGCAAATTCAGGACCTGATTCCAATGGCTCACAGTTTTTCTTTACCACAGTGAAGGCCAGATGgtaagttatttttgtccttaaagtgtatggtttgggcgatttctagactggggatcagatgcagttggattagttcttgtaggttaagcgcagtcttttt
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