1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTTATGAGGGCTTGGACTGGTTGTCCACAACTCTGAAGGAGAGAAGAGCTGCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaactatcatcttatttcaatcacgagctaccttcatgtttatcatcccattacattataggttttctccgctgcag
species | Glycine max |
transcript | GLYMA12G02110.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAG AGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGGEST: gi|192310498|gb|FG999199.1|FG999199
genomic: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaacta ... tccgctgcagAGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGG
EST: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAG AGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGEST: gi|58017541|gb|CX704283.1|CX704283
genomic: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaacta ... tccgctgcagAGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTG
EST: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAG AGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGGEST: gi|58024666|gb|CX711407.1|CX711407
genomic: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaacta ... tccgctgcagAGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGG
EST: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAG AGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGGEST: gi|58017601|gb|CX704343.1|CX704343
genomic: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaacta ... tccgctgcagAGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGG
EST: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAG AGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGGEST: gi|192310499|gb|FG999200.1|FG999200
genomic: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaacta ... tccgctgcagAGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGG
EST: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAG AGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGG
genomic: GCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaacta ... tccgctgcagAGGTATTTTGGCCTTCGGATTTGGCAATGGACGAATTTGTAGAGTGTGTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTATGAGGGCTTGGACTGGTTGTCCACAACTCTGAAGGAGAGAAGAGCTGCTGGATACTCTTCAATAGGACTAGGCACTTCATCCTTCTAATTTTCAAGgtttgaactatcatcttatttcaatcacgagctaccttcatgtttatcatcccattacattataggttttctccgctgcag
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