1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACTACTAAAACCTGGAGGGACCTATATTTTGgtaatcttatgcattacatggataagactttctttgtatcagtgtgctaaatcagttttgcaagtttcgagagtataatgaattaataaattgtcacttgtttcag
species | Glycine max |
transcript | GLYMA12G01270.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AACCTGGAGGGACCTATATTTTG ATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTGEST: gi|208313371|gb|GE115633.1|GE115633
genomic: AACCTGGAGGGACCTATATTTTGgtaatcttat ... cttgtttcagATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTG
EST: ACTACTAAAACCTGGAGGGACCTATATTTTG ATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTGEST: gi|298172641|gb|HO019681.1|HO019681
genomic: ACTACTAAAACCTGGAGGGACCTATATTTTGgtaatcttat ... cttgtttcagATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTG
EST: ACTACTAAAACCTGGAGGGACCTATATTTTG ATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTGEST: gi|15287181|gb|BI471072.1|BI471072
genomic: ACTACTAAAACCTGGAGGGACCTATATTTTGgtaatcttat ... cttgtttcagATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTG
EST: ACTACTAAAACCTGGAAGGACCTATATTTTG ATTACATATGGCGATCCAEST: gi|207777459|gb|GD750542.1|GD750542
genomic: ACTACTAAAACCTGGAGGGACCTATATTTTGgtaatcttat ... cttgtttcagATTACATATGGCGATCCA
EST: ACTACTAAAACCTGGAGGGACCTATATTTTG ATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTG
genomic: ACTACTAAAACCTGGAGGGACCTATATTTTGgtaatcttat ... cttgtttcagATTACATATGGCGATCCAACAGTAAGGATGCCTCATATAAGCAGACCGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTACTAAAACCTGGAGGGACCTATATTTTGgtaatcttatgcattacatggataagactttctttgtatcagtgtgctaaatcagttttgcaagtttcgagagtataatgaattaataaattgtcacttgtttcag
- - - - - - TGGAGG