1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtgtgaacttgaattataatgtcttgcattttgagatattccaaggactttactaagtgaataacttttctgcag
species | Glycine max |
transcript | GLYMA11G15900.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGEST: gi|213600672|gb|DB956190.1|DB956190
genomic: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGG
EST: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATEST: gi|207751983|gb|GD722128.1|GD722128
genomic: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGAT
EST: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATEST: gi|254338023|gb|GR849655.1|GR849655
genomic: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGAT
EST: GCTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGEST: gi|16346614|gb|BI972209.1|BI972209
genomic: GCTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGG
EST: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGEST: gi|15663805|gb|BI701176.1|BI701176
genomic: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGG
EST: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTEST: gi|15814693|gb|BI786968.1|BI786968
genomic: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGT
EST: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGATCGAGCCCAATT CTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGG
genomic: CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtg ... ttttctgcagCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGCGAGCCCAATTgtaagatgtgtgaacttgaattataatgtcttgcattttgagatattccaaggactttactaagtgaataacttttctgcag
- - - - - - - - - - GGAGCT
- - - - - - - - - - - GAGCTT