1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAGCTCTGGATTCTGATACTGCTTCTAGTACTCGTTCAATGACCGAGGAAGAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAgtgagttgtcagttgtgatggcttcataaaaaaaaatagttataataatgaatcagaagaaaggcttgctgcacatgcttgcattttttgtatctatttt...
species | Glycine max |
transcript | GLYMA11G14590.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAA AGATGGCTCAGCTGGTTTGGCGTCCTCTEST: gi|5342446|gb|AI794730.1|AI794730
genomic: GAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAgtgagttgtc ... ctgttaacagAGATGGCTCAGCTGGTTTGGCGTCCTCT
EST: GAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAA AGATGGCTCAGCTGGTTTGGCGTCCTCTTCAGGTGCAGCTGAGEST: gi|192331131|gb|FK020351.1|FK020351
genomic: GAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAgtgagttgtc ... ctgttaacagAGATGGCTCAGCTGGTTTGGCGTCCTCTTCAGGTGCAGCTGAG
EST: GAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAA AGATGGCTCAGCTGGTTTGGCGTCCTCT
genomic: GAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAgtgagttgtc ... ctgttaacagAGATGGCTCAGCTGGTTTGGCGTCCTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTCTGGATTCTGATACTGCTTCTAGTACTCGTTCAATGACCGAGGAAGAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAgtgagttgtcagttgtgatggcttcataaaaaaaaatagttataataatgaatcagaagaaaggcttgctgcacatgcttgcattttttgtatctatttt
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