1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTGATTTGTCTGCGCTGTATAGACATGGATGTCGTAAAGCGACCAAAGATGGGTCAAATTATTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTgtaagtactacacttcatccactccttctcagtttctcacaaaataccatttcatcttccttaaatgactgactttaagttgttaaacag
species | Glycine max |
transcript | GLYMA11G12570.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGGGTCAAATTATTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCT GAGCTACGTTCAGTTAGAGAGAAAGATCCTGTGCCEST: gi|21257314|gb|BQ454202.1|BQ454202
genomic: TGGGTCAAATTATTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTgtaagtacta ... tgttaaacagGAGCTACGTTCAGTTAGAGAGAAAGATCCTGTGCC
EST: CCTTTCGTTCT GAGCTACGTTCAGTTAGAGAGAAAGATCCTGTGCCTTCTCATGCGGACGTT
genomic: CCTTTCGTTCTgtaagtacta ... tgttaaacagGAGCTACGTTCAGTTAGAGAGAAAGATCCTGTGCCTTCTCATGCGGACGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGATTTGTCTGCGCTGTATAGACATGGATGTCGTAAAGCGACCAAAGATGGGTCAAATTATTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTgtaagtactacacttcatccactccttctcagtttctcacaaaataccatttcatcttccttaaatgactgactttaagttgttaaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG