1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGGACTTGTTGGGCTGGGTTTATCAAAGCTTTTCCATGCGTCTGGTTCAGAAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAGgtatcatatcatggtagtaagtaataaaaaaatacagtatggttgcaattgtttactgataggaatcttcagtttaggaagaaagaaaaagaaaacagag...
species | Glycine max |
transcript | GLYMA11G11960.3 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAG AAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAGEST: gi|14010995|gb|BG725917.1|BG725917
genomic: AAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAGgtatcatatc ... gagattgcagAAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAG
EST: AAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAG AAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAGEST: gi|7478069|gb|AW666124.1|AW666124
genomic: AAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAGgtatcatatc ... gagattgcagAAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAG
EST: TGACCTTTCCAATTCAATGGGCTTGTTTCTACAG AAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAGEST: gi|58014892|gb|CX701634.1|CX701634
genomic: TGACCTTTCCAATTCAATGGGCTTGTTTCTACAGgtatcatatc ... gagattgcagAAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAG
EST: AGATCTGGCTCCAGATGACC-TTCCAAATTCAATGGGC-TGTTTCTACAG AAAACAAACATTATTCGAGA-TATCTGGAAGACATCAATGAGATCCCCAAGEST: gi|193655424|gb|FK607480.1|FK607480
genomic: AGATCTGGCTCCAGATGACCTTTCC-AATTCAATGGGCTTGTTTCTACAGgtatcatatc ... gagattgcagAAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAAG
EST: AAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAG AAAACAAACATTATTCGAGATTATCTGGAAEST: gi|207799180|gb|GD771735.1|GD771735
genomic: AAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAGgtatcatatc ... gagattgcagAAAACAAACATTATTCGAGATTATCTGGAA
EST: ATGACCTTTCCAATTCAATGGGCTTGTTTCTTACAG AAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAA
genomic: ATGACCTTTCCAATTCAATGGGCTTGTTTC-TACAGgtatcatatc ... gagattgcagAAAACAAACATTATTCGAGATTATCTGGAAGACATCAATGAGATCCCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGACTTGTTGGGCTGGGTTTATCAAAGCTTTTCCATGCGTCTGGTTCAGAAGATCTGGCTCCAGATGACCTTTCCAATTCAATGGGCTTGTTTCTACAGgtatcatatcatggtagtaagtaataaaaaaatacagtatggttgcaattgtttactgataggaatcttcagtttaggaagaaagaaaaagaaaacagag
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