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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACTTTCCTTTGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAGgtatttattgtatcatctagaaattgaaattgaaatgttttaccaagctttctagttctattttaatatgtttacattttctcttttaattatgacag

Basic information

species Glycine max
transcript GLYMA11G07910.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207846669|gb|GD819994.1|GD819994
EST:     TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
genomic: TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
EST: gi|13791595|gb|BG654186.1|BG654186
EST:     TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
genomic: TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
EST: gi|23052777|gb|BU577268.1|BU577268
EST:     TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGAC
genomic: TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGAC
EST: gi|7233548|gb|AW568953.1|AW568953
EST:     TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
genomic: TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
EST: gi|207846938|gb|GD819479.1|GD819479
EST:     TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
genomic: TGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
EST: gi|120533133|gb|EH261266.1|EH261266
EST:     ACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
genomic: ACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
EST: gi|120533498|gb|EH261631.1|EH261631
EST:     ACAGACTGCTGTCATGACGGGGGAG                         TGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG
genomic: ACAGACTGCTGTCATGACGGGGGAGgtatttattg ... attatgacagTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTG