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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTTGGCAACAAGTATGACACCAAATTGCTAGAAATAATTGATGCAAGgtgagttcatgaatcggtggaatatctcagcatctggttttccttatttacaagtactttggatctcattgattttccctcctttcctctgttttcattctccatgttaaagtctttctataaaactgacaaaaggttattgagaagcttcttggtttggctttgccag

Basic information

species Glycine max
transcript GLYMA11G07660.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G07660.1 (Glycine max), 5'ss of exon 6
lower sequence: AT2G18180.1 (Arabidopsis thaliana), 5'ss of exon 7
GTTCTTGGCAACAAGTATGACACCAAATTGCTAGAAATAATTGATGCAAGgtgagttcatgaatcggtggaatatctcagcatctggttttccttatttacaagtactttggatctcattgattttccctcctttcctctgttttcattctccatgttaaagtctttctataaaactgacaaaaggttattgagaagcttcttggtttggctttgccag
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GTTCTTGGCAACAAGTACCAAAGCAAGTTGCTTGAAATAATTGATGCTAGgtgagctct-------gcaaaaagtttctgcat---gaacactcaaaagattagtatttctcgaatgacagacttctcat--ttttctttgtatcag------------------------------------------------------------------------