1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGTTACGAGACCACTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattttttaatatccctgaggggattcggtaagagtttcattcgtatttggttctttgtttcttgtatcttctgttcaacattttcacaagttat...
species | Glycine max |
transcript | GLYMA11G07200.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGG GTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTCEST: gi|209698445|gb|BW667242.1|BW667242
genomic: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattt ... tatgatttagGTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTC
EST: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGG GTTCGATTAGTTGCTGACEST: gi|213603451|gb|DB970492.1|DB970492
genomic: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattt ... tatgatttagGTTCGATTAGTTGCTGAC
EST: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGG GTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTCEST: gi|8826552|gb|BE210282.1|BE210282
genomic: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattt ... tatgatttagGTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTC
EST: CTTAGAGCAGAATCAAAAAGGAGTTTTAGTCATATGGGGCAATCAAACTG GTTCGATTTAGTT-CTGACEST: gi|26058824|gb|CA801738.1|CA801738
genomic: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattt ... tatgatttagGTTCGATT-AGTTGCTGAC
EST: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGG GTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTC
genomic: CTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattt ... tatgatttagGTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTACGAGACCACTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGgtaggtattttttaatatccctgaggggattcggtaagagtttcattcgtatttggttctttgtttcttgtatcttctgttcaacattttcacaagttat
- - - - - - - - AGAGCA
- - - - - - - - GAGCAG