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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTGATCCAGGTTCATGCTGTTATGCACTGTATGCAAAGTTGAACCCTGATACAGTTCTCTTGCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAGgttgtatgcagttaatttaataatatatatatatatatatatatatatatatatatatatatatatctttgaattttttcccattttcatctcttgaaacttagcttatttttttattactccaatacttttag

Basic information

species Glycine max
transcript GLYMA11G06900.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193601559|gb|FK549450.1|FK549450
EST:     GCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAG                         AACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCA
genomic: GCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAGgttgtatgca ... atacttttagAACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCA
EST: gi|13477617|gb|BG507426.1|BG507426
EST:     ATACAGTTCTCTTGCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAG                         AACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCA
genomic: ATACAGTTCTCTTGCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAGgttgtatgca ... atacttttagAACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCA
EST: gi|193441203|gb|FK404522.1|FK404522
EST:     GCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAG                         AACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCA
genomic: GCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAGgttgtatgca ... atacttttagAACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCA