1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TGTTGTATTTGCTTCATGTTTCCTGTTTATGCTTTACAAATTGATGTCGTCGTGGTTCATTGATGTCTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGgtatgaacttccactaaatcagtctaaaattcgataattttgcatctgtgaggaaaaaaaaaaatctatgcttattatgtctatgtaggaaaaagaagcc...
species | Glycine max |
transcript | GLYMA11G02540.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTGTATTGGTGGTATTGAG GGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGEST: gi|254328592|gb|GR832964.1|GR832964
genomic: CTGTATTGGTGGTATTGAGgtatgaactt ... gtatgtgtagGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAG
EST: CGTGGTTCATTGATGTCTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAG GGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGEST: gi|208066190|gb|GD863987.1|GD863987
genomic: CGTGGTTCATTGATGTCTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGgtatgaactt ... gtatgtgtagGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAG
EST: GTATTGGTGGTATTGAG GGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAG
genomic: GTATTGGTGGTATTGAGgtatgaactt ... gtatgtgtagGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGTATTTGCTTCATGTTTCCTGTTTATGCTTTACAAATTGATGTCGTCGTGGTTCATTGATGTCTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGgtatgaacttccactaaatcagtctaaaattcgataattttgcatctgtgaggaaaaaaaaaaatctatgcttattatgtctatgtaggaaaaagaagcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaag