1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCTGGAGCTGCATATCTTGCTTCAATGTTTCTCAAGATTGATCTTACTGCTTATCACAATATCTGGCAAGAGTTTGAGGCAACACCATCCATTCTTCGAGgtactcttcacccactcctcccttccttccctttctcccctttcccttgttaagcaacaagtgttgaatttatactattttgatttctaaaatggttggt...
species | Glycine max |
transcript | GLYMA11G00680.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTATCACAATATCTGGCAAGAGTTTGAGGCAACACCATCCATTCTTCGAG ATATCTCGCAGCAATTAATGGAGCTCGTTTAAATGTATAAAGAATGTGATGEST: gi|213617353|gb|DB978979.1|DB978979
genomic: TTATCACAATATCTGGCAAGAGTTTGAGGCAACACCATCCATTCTTCGAGgtactcttca ... ttttatgcagATATCTCGCAGCAATTAATGGAGCTCGTTTAAATGTATAAAGAATGTGATG
EST: TATCACAATATCTGGCAAGAGTTTGAGGCAACACCATCCATAT-TTCGAG ATATCTCGCAGCAATTAATGGAGCTCGTTTAAATGTATAAAGAATGTGAT
genomic: TATCACAATATCTGGCAAGAGTTTGAGGCAACACCATCCAT-TCTTCGAGgtactcttca ... ttttatgcagATATCTCGCAGCAATTAATGGAGCTCGTTTAAATGTATAAAGAATGTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGGAGCTGCATATCTTGCTTCAATGTTTCTCAAGATTGATCTTACTGCTTATCACAATATCTGGCAAGAGTTTGAGGCAACACCATCCATTCTTCGAGgtactcttcacccactcctcccttccttccctttctcccctttcccttgttaagcaacaagtgttgaatttatactattttgatttctaaaatggttggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcccct