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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATGTTTCCTTGGATAATCTGCGACCCAATACAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAATGGTTACTCCAAGgtcacaaataattattacattttctttgatgaattataagttaatgagttgctgtcttgctttattaattattatatattattcctcatggatcgatcag

Basic information

species Glycine max
transcript GLYMA11G00570.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G00570.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv10s0116g00680.t01 (Vitis vinifera), 5'ss of exon 6
GGATGTTTCCTTGGATAATCTGCGACCCAATACAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAATGGTTACTCCAAGgtcacaaataattattacattttctttgatgaattataagttaatgagttgctgtcttgctttattaattattatatattattcctcatggatcgatcag
 |||||||| ||||||||  | ||  |   | ||||  ||||||  |||||||| || ||||||||||| || ||||| || || ||||||||||||||||| ||||     | |  |  |        |  |   |        ||| |  | | ||    |  | ||| | ||    | ||| |  |  |        
TGATGTTTCATTGGATAACTTACGCTCTGGTCCAATAACAAGAAATCGAAGAAGACCATCTGGTTGTTTGATCCAAGAGTTACCCAATGGTTACTCCAAGgtgacaa----ctctagctctagtcacagttcaccttgttccttggagatagttttttcaactgatgattgtcatggtgtcttcatttttcag-------