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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCTTCAGCAATTTTTATTGGTGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTTgtaagttggctctctttattataaaagagacaatctgttcaaattatgtatgtggtgacaatgtgacattatttgccatgtgctaccaactttcacctta...

Basic information

species Glycine max
transcript GLYMA10G36580.3
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12689523|gb|BG155859.1|BG155859
EST:     AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTT                         GCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGTGTTCCAACT
genomic: AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTTgtaagttggc ... ctgagtgcagGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGTGTTCCAACT
EST: gi|192330015|gb|FK020831.1|FK020831
EST:     AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTT                         GCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGGGTTCCAACT
genomic: AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTTgtaagttggc ... ctgagtgcagGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGTGTTCCAACT
EST: gi|192328563|gb|FK020781.1|FK020781
EST:     AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTT                         GCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGGGTTCCAACT
genomic: AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTTgtaagttggc ... ctgagtgcagGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGTGTTCCAACT
EST: gi|192328905|gb|FK021374.1|FK021374
EST:     AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTT                         GCTGCACGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGTGTTCCAACT
genomic: AGCAATTGCTAAAGTCATTGCCTGAAAATCTCAGTGCCGTGGCTCATTTTgtaagttggc ... ctgagtgcagGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGTGTTCCAACT