1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaacactatgtaatatagttgtcatataaacaaaataatcatttttttctcatatagtatgctttactgtttccatgaag
species | Glycine max |
transcript | GLYMA10G35230.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTEST: gi|192326781|gb|FK018908.1|FK018908
genomic: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCT
EST: TGGTCGGTAATAAAGCTGATCTT-T-GAGAAGCGGGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTEST: gi|9900885|gb|BE609853.1|BE609853
genomic: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCT
EST: GGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATACAGACATCTEST: gi|298182667|gb|HO031402.1|HO031402
genomic: GGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCT
EST: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGEST: gi|192296028|gb|FG989422.1|FG989422
genomic: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATG
EST: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTEST: gi|4277041|gb|AI431205.1|AI431205
genomic: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCT
EST: TGGTCGGTAATAAAGCTGATCTTCTTGATAAGCGGGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTEST: gi|151411846|gb|EV281657.1|EV281657
genomic: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCT
EST: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAG GATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATGGAGACATCT
genomic: TGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaac ... ttccatgaagGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGgtagtgcaacactatgtaatatagttgtcatataaacaaaataatcatttttttctcatatagtatgctttactgtttccatgaag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC