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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGTTTGGCTACTATTATACACTGTGATGAATTCAGAGGTTTTTTCCCACAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCgtatgtgactaactgcagaatttcattccatgaatgccgtttccatcattaccacaggatttttggtccttaaattttttgttaattctattacag

Basic information

species Glycine max
transcript GLYMA10G28230.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15663644|gb|BI701015.1|BI701015
EST:     CAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGC                         GATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGT
genomic: CAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCgtatgtgact ... tctattacagGATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGT
EST: gi|209706963|gb|BW661522.1|BW661522
EST:     CAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGC                         GATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGT
genomic: CAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCgtatgtgact ... tctattacagGATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGT
EST: gi|8284433|gb|BE021992.1|BE021992
EST:     CAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGC                         GATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGT
genomic: CAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCgtatgtgact ... tctattacagGATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGT