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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGGGACTGTAAATTTGGATTAGCTTGTCGATATCATCATCCTCGGGATCATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGgtatgtatggttattcacttgatttgattattttgtttaattgtctgttttagatttatttaaattttaagttgtgtataaaaatggagtaacttaacag...

Basic information

species Glycine max
transcript GLYMA10G02550.2
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193615911|gb|FK567389.1|FK567389
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCG                         GTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGGGACAATA
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGgtatgtatgg ... ctggcttcagGTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATA
EST: gi|193588851|gb|FK541453.1|FK541453
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCG                         GTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATAT
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGgtatgtatgg ... ctggcttcagGTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATAT
EST: gi|193667290|gb|FK610970.1|FK610970
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCG                         GTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATAT
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGgtatgtatgg ... ctggcttcagGTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATAT
EST: gi|193657623|gb|FK607208.1|FK607208
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCG                         GTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATAT
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGgtatgtatgg ... ctggcttcagGTGCACTAGGATCAACATGGACAGCAATCGATCAGGAGTAAGAGACAATAT
EST: gi|208183379|gb|GD981489.1|GD981489
EST:     ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCG                         GTGCACTAGGATCAACATGGACAGCAATCGATCTAGGTAGTTAAGTAGTAC
genomic: ATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGgtatgtatgg ... ctggcttcagGTGCACTAGGATCAACATGGACAGCAATCGATC-AGG-AGT-AAG-AG-AC