1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATATGTAGAGCTCTAGCTTATATTCACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcacatgaaagcttgttcctttagtttctttagcattctgtattgatctatagtttgcatcttcaatcagcgtatgaggtagaactatagtgtg...
species | Glycine max |
transcript | GLYMA10G01280.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTG GTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAAEST: gi|208333681|gb|GE129554.1|GE129554
genomic: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcac ... ctgatgacagGTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAA
EST: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTG GTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAAEST: gi|208090264|gb|GD885285.1|GD885285
genomic: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcac ... ctgatgacagGTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAA
EST: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTG GTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAAEST: gi|207766685|gb|GD738313.1|GD738313
genomic: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcac ... ctgatgacagGTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAA
EST: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTG GTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAAEST: gi|151399753|gb|EV269624.1|EV269624
genomic: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcac ... ctgatgacagGTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAA
EST: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTG GTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAAEST: gi|193317982|gb|FK284636.1|FK284636
genomic: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcac ... ctgatgacagGTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAA
EST: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTG GTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAA-
genomic: ACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcac ... ctgatgacagGTCAATCCTCACACTCACCAGCTAAAGATTTGTGACTTTGGGAGTGCAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGTAGAGCTCTAGCTTATATTCACAACTGTATTGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGgtacgttcacatgaaagcttgttcctttagtttctttagcattctgtattgatctatagtttgcatcttcaatcagcgtatgaggtagaactatagtgtg
- - - - - - - - - - - - - - - - - TTGGAG