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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAGGGTAGTGGATTGGCTCCATGGCCTGCAAGATTGACCACTCCTCCTCCTAGATTAGCAGACTTTGGCTATTCAAACGAAATGTTTGAAAAGGATACGgtaattggaatttgcaatttattctctggtttgttttaattaggttcttgttcttgtaagcatataaaattattgaactaacaaaggttgaattagattaataggctataagcctaacttttgttctgcggtatag

Basic information

species Glycine max
transcript GLYMA10G00880.2
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G00880.2 (Glycine max), 5'ss of exon 6
lower sequence: AT3G23300.1 (Arabidopsis thaliana), 5'ss of exon 6
CAAGGGTAGTGGATTGGCTCCATGGCCTGCAAGATTGACCACTCCTCCTCCTAGATTAGCAGACTTTGGCTATTCAAACGAAATGTTTGAAAAGGATACGgtaattggaatttgcaatttattctctggtttgttttaattaggttcttgttcttgtaagca-tataaaattattgaactaacaaaggttgaattagattaataggctataagcctaacttttgttctgcggtatag
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CAAGGGAAGTGGATTGGCTCCATGGCCAGCTCGATTAACCTCTCCTCCTCCTCGGCTAGCTGACTTTGGCTATTCCACTGACATTTTTGAGAAGGATACAgta--tgttatgcccattatccttttta-tttgttgcaattgaagctccaataatataaagactgtagtcaccttaaatcattgcttgctcatacag----------------------------------------