1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGTACTATGGCTTGGCTATTCGAGAAACCCGAATCAAGGCTGCGCCTGTGCATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatctacctgaatttgttacattaaatactaatgcatgacctaaaagttctggtccaagtattataacactagttgattcaatgattatgctgga...
species | Glycine max |
transcript | GLYMA09G33160.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAAEST: gi|9899441|gb|BE608409.1|BE608409
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTEST: gi|16348949|gb|BI974544.1|BI974544
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCT
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAAEST: gi|192308463|gb|FK000931.1|FK000931
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTCTTGACAAEST: gi|15813600|gb|BI785875.1|BI785875
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAAEST: gi|8282807|gb|BE020368.1|BE020368
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAAEST: gi|193381561|gb|FK347026.1|FK347026
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
EST: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAG TTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
genomic: CATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatct ... tttggtgcagTTATGGTATTGCTGCAATCTCTCCATTTTCTCACAGACTGAGTTTTGACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTACTATGGCTTGGCTATTCGAGAAACCCGAATCAAGGCTGCGCCTGTGCATGCATCAGCCCATTGGTATCTGGAGAATGTTTTGCCTGTTCTACAGAGgttggtatctacctgaatttgttacattaaatactaatgcatgacctaaaagttctggtccaagtattataacactagttgattcaatgattatgctgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA