1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TCCTTTAATTGGCTCATCTATTCAGTCAGCTACTGGGGTAGTGTATAACATTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAGgtacctcggaattttattggcagaaagaacatttcagtattctttttgatcttatgaatttgttgcaaacatttgtatcctgttttcaaaacttcataactgttgtag
species | Glycine max |
transcript | GLYMA08G43500.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAG GTTGTGACTAGTTTAGCCGACCCTTCTGCCAATATTATATTTEST: gi|207833203|gb|GD801842.1|GD801842
genomic: TTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAGgtacctcgga ... actgttgtagGTTGTGACTAGTTTAGCCGACCCTTCTGCCAATATTATATTT
EST: TTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAG GTTGTGACTAGTTTAGCCGA
genomic: TTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAGgtacctcgga ... actgttgtagGTTGTGACTAGTTTAGCCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCTTTAATTGGCTCATCTATTCAGTCAGCTACTGGGGTAGTGTATAACATTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAGgtacctcggaattttattggcagaaagaacatttcagtattctttttgatcttatgaatttgttgcaaacatttgtatcctgttttcaaaacttcataactgttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA