1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTAACAAAGAAGGCCATCATTGTTTATCCCAATAGTGGGGAGGTATGGGATGGTAAAGCCAAGAAATGGCTTgtaagtttgggttctctcgctctctctcacactctcacatttatatccattatttgttatgtttcatctgataatcaagttttttctatttgttttaaatggcag
species | Glycine max |
transcript | GLYMA08G30150.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTTATCCCAATAGTGGGGAGGTATGGGATGGTAAAGCCAAGAAATGGCTT CCATCTAAGTGTTTTCACGATGATGAATTTGGATTTAATGCAACAAGGTGGEST: gi|254319017|gb|GR830473.1|GR830473
genomic: TTTATCCCAATAGTGGGGAGGTATGGGATGGTAAAGCCAAGAAATGGCTTgtaagtttgg ... taaatggcagCCATCTAAGTGTTTTCACGATGATGAATTTGGATTTAATGCAACAAGGTGG
EST: TTTATCCCAATAGTGGGGAGGTATGGGATGGTAAAGCCAAGAAATGGCTT CCATCTAAGTGTTTTCACGATGATGAATTTGGATTTAATGCAACAAGGTGG
genomic: TTTATCCCAATAGTGGGGAGGTATGGGATGGTAAAGCCAAGAAATGGCTTgtaagtttgg ... taaatggcagCCATCTAAGTGTTTTCACGATGATGAATTTGGATTTAATGCAACAAGGTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTAACAAAGAAGGCCATCATTGTTTATCCCAATAGTGGGGAGGTATGGGATGGTAAAGCCAAGAAATGGCTTgtaagtttgggttctctcgctctctctcacactctcacatttatatccattatttgttatgtttcatctgataatcaagttttttctatttgttttaaatggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA