1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGCAGATGTTGGTAGAAGCAAACAGATCCTTGACAGTGAAGgtaataatattataccattattcaaaatatatgcacctcaaccttaacatgatacttcataccttgaatatatccagcttagataatttggttttctttt...
species | Glycine max |
transcript | GLYMA08G27670.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GATCCTTGACAGTGAAG CTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGAAGCTGGTEST: gi|208051908|gb|GD853403.1|GD853403
genomic: GATCCTTGACAGTGAAGgtaataatat ... ttgttgccagCTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGAAGCTGGT
EST: GAGCAGATGTTGGTAGAAGCAAACAGATCCTTGACAGTGAAG CTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGEST: gi|207820113|gb|GD792427.1|GD792427
genomic: GAGCAGATGTTGGTAGAAGCAAACAGATCCTTGACAGTGAAGgtaataatat ... ttgttgccagCTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGG
EST: GGTAGAAGCAAACAGATCCTTGACAGTGAAG CTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGAAGCTGGTEST: gi|208105287|gb|GD905516.1|GD905516
genomic: GGTAGAAGCAAACAGATCCTTGACAGTGAAGgtaataatat ... ttgttgccagCTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGAAGCTGGT
EST: GAGCAGATGTTGGTAGAAGCAAACAGATCCTTGACAGTGAAG CTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGAAGCTGGT
genomic: GAGCAGATGTTGGTAGAAGCAAACAGATCCTTGACAGTGAAGgtaataatat ... ttgttgccagCTGGAAGAAATCAATTCAAGAAACCACTACAGGCAATCATGGGAAGCTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCAGATGTTGGTAGAAGCAAACAGATCCTTGACAGTGAAGgtaataatattataccattattcaaaatatatgcacctcaaccttaacatgatacttcataccttgaatatatccagcttagataatttggttttctttt
- GCAGAT
- CAGATG
- - - - - - - AGAAGC
- - - - - - - - AAGCAA