1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CATTGCTGATGAGGGTGAGTACATGCAGTGGTATCAGAAGATTACCCGGAAATATATCAGGAGAGTCACATCATCCCTGGAATCAGAGTATCAAAGAACAgtatttctttgcttagttatcattgtttgtcttttactggaatgtatgttaatatcaatacttttacttgactgctacatgcttttacag
species | Glycine max |
transcript | GLYMA08G20470.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AATATATCAGGAGAGTCACATCATCCCTGGAATCAGAGTATCAAAGAACA GTTACTGCTATGAGGGAAATTGCAAATATTGCTGATATAGTCTCAGCAGAAEST: gi|208137388|gb|GD937968.1|GD937968
genomic: AATATATCAGGAGAGTCACATCATCCCTGGAATCAGAGTATCAAAGAACAgtatttcttt ... gcttttacagGTTACTGCTATGAGGGAAATTGCAAATATTGCTGATATAGTCTCAGCAGAA
EST: AATATATCAGGAGAGTCACATCATCCCTGGAATCAGAGTATCAAAGAACA GTTACTGCTATGAGGGAAATTGCAAATATTGCTGATATAGTCTCAGCAGAA
genomic: AATATATCAGGAGAGTCACATCATCCCTGGAATCAGAGTATCAAAGAACAgtatttcttt ... gcttttacagGTTACTGCTATGAGGGAAATTGCAAATATTGCTGATATAGTCTCAGCAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTGCTGATGAGGGTGAGTACATGCAGTGGTATCAGAAGATTACCCGGAAATATATCAGGAGAGTCACATCATCCCTGGAATCAGAGTATCAAAGAACAgtatttctttgcttagttatcattgtttgtcttttactggaatgtatgttaatatcaatacttttacttgactgctacatgcttttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC