1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATGGACAAAATCTTGGTCAATTTAAGGGGCTTGTTGCATCAGACAAGAATATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatatgacggttttcttttcctggctctctttatttttccatgcgatccctcatttgttttatctttttgaggagataatgttgggctctgttaa...
species | Glycine max |
transcript | GLYMA08G18500.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTAEST: gi|7478474|gb|AW666280.1|AW666280
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTAEST: gi|120533717|gb|EH261850.1|EH261850
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTAEST: gi|10231134|gb|BE800081.1|BE800081
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTAEST: gi|7028660|gb|AW458443.1|AW458443
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTAEST: gi|209706232|gb|BW656737.1|BW656737
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTAEST: gi|8670000|gb|BE191107.1|BE191107
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
EST: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTG ATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
genomic: TATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatat ... agggatgcagATATAAAATTGGTGCCAGAGTTGTCAGAAAAGTTGCTTGATCTTCCTGTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGACAAAATCTTGGTCAATTTAAGGGGCTTGTTGCATCAGACAAGAATATAGTTTCTCCCAGGGTTGCAGAAGTGACAGGAAGGACGCCACCACTTGgtatgaatatgacggttttcttttcctggctctctttatttttccatgcgatccctcatttgttttatctttttgaggagataatgttgggctctgttaa
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